<H2>Description</H2>
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Candidate predictions for structural RNA families. EvoFold structural predictions were based on a 31-way subset of the genome-wide 44-way multiZ alignment (consisting of 28 of the 29 eutherian mammals, together with opossum, chicken, and tetraodon as outgroups) and clustered into candidate families using the novel EvoFam algorithm.  This data, as well as the complete set of structure predictions from the EvoFold screen can be downloaded in bulk or browsed through a UCSC Genome Mirror from the following web?site: http://moma.ki.au.dk/~jsp/mammals/. 
In addition, individual families are listed and annotated in the following reference and its supplement.
<H2>Detail</H2>
There are three tracks in this set:<BR>
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<LI> Genome_wide_prediction_set</LI>
<LI>Genome_wide_with_paralogs_prediction_set</LI>
<LI>UTR_with_paralogs_prediction_set</LI>
<H2>Credits</H2>
Contacts: Brian Parker bparker@binf.ku.dk, Stefan Washietl <wash@csail.mit.edu>
<H2>References</H2>
Reference: Parker, B. J. et al. New families of human regulatory RNA structures identified by comparative analysis of vertebrate genomes. Genome Research (2011).
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