Ce11 26-way Genome size statistics: Difference between revisions

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   <TH>chain<BR>linearGap</TH>
   <TH>chain<BR>linearGap</TH>
<TR>
<TR>
<TR><TH ALIGN=RIGHT>[N/A 01]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/genome/assembly/554278 01]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ce11 ce11]</TH>
<TH ALIGN=RIGHT>7</TH>
<TH ALIGN=RIGHT>7</TH>
   <TD ALIGN=RIGHT>100,286,401</TD><TD ALIGN=RIGHT>100,286,401</TD>
   <TD ALIGN=RIGHT>100,286,401</TD><TD ALIGN=RIGHT>100,286,401</TD>
   <TD ALIGN=RIGHT>0</TD><TD ALIGN=RIGHT>%&nbsp;12.62</TD>
   <TD ALIGN=RIGHT>0</TD><TD ALIGN=RIGHT>%&nbsp;12.62</TD>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/invertebrates/Caenorhabditis_elegans/WBcel235/ C. elegans]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCA_000002985.3_WBcel235/ C. elegans]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>17493829</TH>
<TH ALIGN=CENTER>17493829</TH>
   <TD ALIGN=CENTER>N/A</TD><TD ALIGN=RIGHT>N/A</TD>
   <TD ALIGN=CENTER>N/A</TD><TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>N/A</TD>
<TD ALIGN=RIGHT>N/A</TD>
   <TD ALIGN=CENTER>N/A</TD></TR>
   <TD ALIGN=CENTER>N/A</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/invertebrates/Caenorhabditis_japonica/C_japonica-7.0.1/ 02]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4 caeJap4]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000147155.1 02]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeJap4 caeJap4]</TH>
<TH ALIGN=RIGHT>18,817</TH>
<TH ALIGN=RIGHT>18,817</TH>
   <TD ALIGN=RIGHT>166,256,191</TD><TD ALIGN=RIGHT>154,057,934</TD>
   <TD ALIGN=RIGHT>166,256,191</TD><TD ALIGN=RIGHT>154,057,934</TD>
   <TD ALIGN=RIGHT>12,198,257</TD><TD ALIGN=RIGHT>%&nbsp;46.77</TD>
   <TD ALIGN=RIGHT>12,198,257</TD><TD ALIGN=RIGHT>%&nbsp;46.77</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABLE03 C. japonica]</TD><TH ALIGN=CENTER>22X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Caenorhabditis_japonica/all_assembly_versions/GCA_000147155.1_C_japonica-7.0.1/ C. japonica]</TD><TH ALIGN=CENTER>22X</TH>
<TH ALIGN=CENTER>94149</TH>
<TH ALIGN=CENTER>94149</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>27.709%</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>27.709%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/invertebrates/Caenorhabditis_brenneri/C_brenneri-6.0.1b/ 03]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3 caePb3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000143925.2 03]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caePb3 caePb3]</TH>
<TH ALIGN=RIGHT>3,305</TH>
<TH ALIGN=RIGHT>3,305</TH>
   <TD ALIGN=RIGHT>190,369,721</TD><TD ALIGN=RIGHT>170,093,638</TD>
   <TD ALIGN=RIGHT>190,369,721</TD><TD ALIGN=RIGHT>170,093,638</TD>
   <TD ALIGN=RIGHT>20,276,083</TD><TD ALIGN=RIGHT>%&nbsp;29.30</TD>
   <TD ALIGN=RIGHT>20,276,083</TD><TD ALIGN=RIGHT>%&nbsp;29.30</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=ABEG02 C. brenneri]</TD><TH ALIGN=CENTER>9.5X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Caenorhabditis_brenneri/all_assembly_versions/GCA_000143925.2_C_brenneri-6.0.1b/ C. brenneri]</TD><TH ALIGN=CENTER>9.5X</TH>
<TH ALIGN=CENTER>381961</TH>
<TH ALIGN=CENTER>381961</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>40.638%</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>40.638%</TD>
Line 74: Line 74:
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.ncbi.nlm.nih.gov/genbank/genomes/Eukaryotes/invertebrates/Caenorhabditis_sp_9_MAF_2010/Caenorhabditis_sp9_JU1422-3.0.1/ 05]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111 caeSp111]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000186765.1 05]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp111 caeSp111]</TH>
<TH ALIGN=RIGHT>665</TH>
<TH ALIGN=RIGHT>665</TH>
   <TD ALIGN=RIGHT>79,321,433</TD><TD ALIGN=RIGHT>76,497,192</TD>
   <TD ALIGN=RIGHT>79,321,433</TD><TD ALIGN=RIGHT>76,497,192</TD>
   <TD ALIGN=RIGHT>2,824,241</TD><TD ALIGN=RIGHT>%&nbsp;29.15</TD>
   <TD ALIGN=RIGHT>2,824,241</TD><TD ALIGN=RIGHT>%&nbsp;29.15</TD>
   <TD ALIGN=CENTER>[http://www.ncbi.nlm.nih.gov/Traces/wgs/?val=AEKS01 C. tropicalis]</TD><TH ALIGN=CENTER>20.2X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Caenorhabditis_sp._11_KK-2011/all_assembly_versions/GCA_000186765.1_Caenorhabditis_sp11_JU1373-3.0.1/ C. tropicalis]</TD><TH ALIGN=CENTER>20.2X</TH>
<TH ALIGN=CENTER>20921866</TH>
<TH ALIGN=CENTER>20921866</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>37.870%</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>37.870%</TD>
Line 92: Line 92:
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 07]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng2 caeAng2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/c_angaria 07]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeAng2 caeAng2]</TH>
<TH ALIGN=RIGHT>34,621</TH>
<TH ALIGN=RIGHT>34,621</TH>
   <TD ALIGN=RIGHT>105,997,628</TD><TD ALIGN=RIGHT>94,555,035</TD>
   <TD ALIGN=RIGHT>105,997,628</TD><TD ALIGN=RIGHT>94,555,035</TD>
   <TD ALIGN=RIGHT>11,442,593</TD><TD ALIGN=RIGHT>%&nbsp;39.91</TD>
   <TD ALIGN=RIGHT>11,442,593</TD><TD ALIGN=RIGHT>%&nbsp;39.91</TD>
   <TD ALIGN=CENTER>[N/A C. angaria]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJNA51225/ C. angaria]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>79858</TH>
<TH ALIGN=CENTER>79858</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>17.682%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>17.682%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 08]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp51 caeSp51]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/c_sp5 08]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=caeSp51 caeSp51]</TH>
<TH ALIGN=RIGHT>15,261</TH>
<TH ALIGN=RIGHT>15,261</TH>
   <TD ALIGN=RIGHT>131,797,386</TD><TD ALIGN=RIGHT>130,391,159</TD>
   <TD ALIGN=RIGHT>131,797,386</TD><TD ALIGN=RIGHT>130,391,159</TD>
   <TD ALIGN=RIGHT>1,406,227</TD><TD ALIGN=RIGHT>%&nbsp;28.16</TD>
   <TD ALIGN=RIGHT>1,406,227</TD><TD ALIGN=RIGHT>%&nbsp;28.16</TD>
   <TD ALIGN=CENTER>[N/A C. sp. 5 ju800]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJNA194557/ C. sp. 5 ju800]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>25228</TH>
<TH ALIGN=CENTER>25228</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>40.332%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>40.332%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 09]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1 hetBac1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000223415.1/ 09]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=hetBac1 hetBac1]</TH>
<TH ALIGN=RIGHT>1,241</TH>
<TH ALIGN=RIGHT>1,241</TH>
   <TD ALIGN=RIGHT>76,992,477</TD><TD ALIGN=RIGHT>74,374,900</TD>
   <TD ALIGN=RIGHT>76,992,477</TD><TD ALIGN=RIGHT>74,374,900</TD>
   <TD ALIGN=RIGHT>2,617,577</TD><TD ALIGN=RIGHT>%&nbsp;24.47</TD>
   <TD ALIGN=RIGHT>2,617,577</TD><TD ALIGN=RIGHT>%&nbsp;24.47</TD>
   <TD ALIGN=CENTER>[N/A H. bacteriophora/m31e]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Heterorhabditis_bacteriophora/all_assembly_versions/GCA_000223415.1_Heterorhabditis_bacteriophora-7.0/ H. bacteriophora/m31e]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>312328</TH>
<TH ALIGN=CENTER>312328</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>10.486%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>10.486%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 10]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1 panRed1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/p_redivivus 10]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=panRed1 panRed1]</TH>
<TH ALIGN=RIGHT>941</TH>
<TH ALIGN=RIGHT>941</TH>
   <TD ALIGN=RIGHT>65,110,236</TD><TD ALIGN=RIGHT>62,090,108</TD>
   <TD ALIGN=RIGHT>65,110,236</TD><TD ALIGN=RIGHT>62,090,108</TD>
   <TD ALIGN=RIGHT>3,020,128</TD><TD ALIGN=RIGHT>%&nbsp;14.57</TD>
   <TD ALIGN=RIGHT>3,020,128</TD><TD ALIGN=RIGHT>%&nbsp;14.57</TD>
   <TD ALIGN=CENTER>[N/A Microworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJNA186477/ Microworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>262414</TH>
<TH ALIGN=CENTER>262414</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.585%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.585%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 11]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2 strRat2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_001040885.1/ 11]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=strRat2 strRat2]</TH>
<TH ALIGN=RIGHT>135</TH>
<TH ALIGN=RIGHT>135</TH>
   <TD ALIGN=RIGHT>43,150,242</TD><TD ALIGN=RIGHT>42,896,169</TD>
   <TD ALIGN=RIGHT>43,150,242</TD><TD ALIGN=RIGHT>42,896,169</TD>
   <TD ALIGN=RIGHT>254,073</TD><TD ALIGN=RIGHT>%&nbsp;55.64</TD>
   <TD ALIGN=RIGHT>254,073</TD><TD ALIGN=RIGHT>%&nbsp;55.64</TD>
   <TD ALIGN=CENTER>[N/A Threadworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Strongyloides_ratti/all_assembly_versions/GCA_001040885.1_S_ratti_ED321/ Threadworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>11693564</TH>
<TH ALIGN=CENTER>11693564</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.669%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.669%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 12]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ascSuu1 ascSuu1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000298755.1 12]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ascSuu1 ascSuu1]</TH>
<TH ALIGN=RIGHT>12,989</TH>
<TH ALIGN=RIGHT>12,989</TH>
   <TD ALIGN=RIGHT>269,573,965</TD><TD ALIGN=RIGHT>262,604,319</TD>
   <TD ALIGN=RIGHT>269,573,965</TD><TD ALIGN=RIGHT>262,604,319</TD>
   <TD ALIGN=RIGHT>6,969,646</TD><TD ALIGN=RIGHT>%&nbsp;21.48</TD>
   <TD ALIGN=RIGHT>6,969,646</TD><TD ALIGN=RIGHT>%&nbsp;21.48</TD>
   <TD ALIGN=CENTER>[N/A Pig roundworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Ascaris_suum/all_assembly_versions/GCA_000298755.1_AscSuum_1.0/ Pig roundworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>413062</TH>
<TH ALIGN=CENTER>413062</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.722%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.722%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 13]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2 haeCon2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/h_contortus 13]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=haeCon2 haeCon2]</TH>
<TH ALIGN=RIGHT>23,823</TH>
<TH ALIGN=RIGHT>23,823</TH>
   <TD ALIGN=RIGHT>369,720,058</TD><TD ALIGN=RIGHT>345,915,897</TD>
   <TD ALIGN=RIGHT>369,720,058</TD><TD ALIGN=RIGHT>345,915,897</TD>
   <TD ALIGN=RIGHT>23,804,161</TD><TD ALIGN=RIGHT>%&nbsp;21.16</TD>
   <TD ALIGN=RIGHT>23,804,161</TD><TD ALIGN=RIGHT>%&nbsp;21.16</TD>
   <TD ALIGN=CENTER>[N/A Barber pole worm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJEB506/ Barber pole worm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>83299</TH>
<TH ALIGN=CENTER>83299</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>8.936%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>8.936%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 14]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1 ancCey1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000688135.1 14]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=ancCey1 ancCey1]</TH>
<TH ALIGN=RIGHT>1,736</TH>
<TH ALIGN=RIGHT>1,736</TH>
   <TD ALIGN=RIGHT>313,092,710</TD><TD ALIGN=RIGHT>300,901,610</TD>
   <TD ALIGN=RIGHT>313,092,710</TD><TD ALIGN=RIGHT>300,901,610</TD>
   <TD ALIGN=RIGHT>12,191,100</TD><TD ALIGN=RIGHT>%&nbsp;22.06</TD>
   <TD ALIGN=RIGHT>12,191,100</TD><TD ALIGN=RIGHT>%&nbsp;22.06</TD>
   <TD ALIGN=CENTER>[N/A Hookworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Ancylostoma_ceylanicum/all_assembly_versions/GCA_000688135.1_Acey_2013.11.30.genDNA/ A. ceylanicum]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>668412</TH>
<TH ALIGN=CENTER>668412</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>9.736%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>9.736%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 15]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1 necAme1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCF_000507365.1 15]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=necAme1 necAme1]</TH>
<TH ALIGN=RIGHT>11,865</TH>
<TH ALIGN=RIGHT>11,865</TH>
   <TD ALIGN=RIGHT>244,088,665</TD><TD ALIGN=RIGHT>208,187,215</TD>
   <TD ALIGN=RIGHT>244,088,665</TD><TD ALIGN=RIGHT>208,187,215</TD>
   <TD ALIGN=RIGHT>35,901,450</TD><TD ALIGN=RIGHT>%&nbsp;25.80</TD>
   <TD ALIGN=RIGHT>35,901,450</TD><TD ALIGN=RIGHT>%&nbsp;25.80</TD>
   <TD ALIGN=CENTER>[N/A Hookworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Necator_americanus/all_assembly_versions/GCA_000507365.1_N_americanus_v1/ N. americanus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>211861</TH>
<TH ALIGN=CENTER>211861</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>8.902%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>8.902%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 16]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1 priExs1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/p_exspectatus 16]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priExs1 priExs1]</TH>
<TH ALIGN=RIGHT>4,369</TH>
<TH ALIGN=RIGHT>4,369</TH>
   <TD ALIGN=RIGHT>177,536,987</TD><TD ALIGN=RIGHT>166,915,502</TD>
   <TD ALIGN=RIGHT>177,536,987</TD><TD ALIGN=RIGHT>166,915,502</TD>
   <TD ALIGN=RIGHT>10,621,485</TD><TD ALIGN=RIGHT>%&nbsp;23.30</TD>
   <TD ALIGN=RIGHT>10,621,485</TD><TD ALIGN=RIGHT>%&nbsp;23.30</TD>
   <TD ALIGN=CENTER>[N/A P. exspectatus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJEB6009/ P. exspectatus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>142245</TH>
<TH ALIGN=CENTER>142245</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.222%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.222%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 17]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3 priPac3]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/p_pacificus 17]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=priPac3 priPac3]</TH>
<TH ALIGN=RIGHT>18,084</TH>
<TH ALIGN=RIGHT>18,084</TH>
   <TD ALIGN=RIGHT>172,510,819</TD><TD ALIGN=RIGHT>153,208,199</TD>
   <TD ALIGN=RIGHT>172,510,819</TD><TD ALIGN=RIGHT>153,208,199</TD>
   <TD ALIGN=RIGHT>19,302,620</TD><TD ALIGN=RIGHT>%&nbsp;23.93</TD>
   <TD ALIGN=RIGHT>19,302,620</TD><TD ALIGN=RIGHT>%&nbsp;23.93</TD>
   <TD ALIGN=CENTER>[N/A P. pacificus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJNA12644/ P. pacificus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>1244534</TH>
<TH ALIGN=CENTER>1244534</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.308%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.308%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 18]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=burXyl1 burXyl1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/b_xylophilus 18]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=burXyl1 burXyl1]</TH>
<TH ALIGN=RIGHT>5,528</TH>
<TH ALIGN=RIGHT>5,528</TH>
   <TD ALIGN=RIGHT>74,576,239</TD><TD ALIGN=RIGHT>73,100,506</TD>
   <TD ALIGN=RIGHT>74,576,239</TD><TD ALIGN=RIGHT>73,100,506</TD>
   <TD ALIGN=RIGHT>1,475,733</TD><TD ALIGN=RIGHT>%&nbsp;28.93</TD>
   <TD ALIGN=RIGHT>1,475,733</TD><TD ALIGN=RIGHT>%&nbsp;28.93</TD>
   <TD ALIGN=CENTER>[N/A Pine wood nematode]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJEA64437/ Pine wood nematode]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>949830</TH>
<TH ALIGN=CENTER>949830</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.291%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>6.291%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 19]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal2 bruMal2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/b_malayi 19]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=bruMal2 bruMal2]</TH>
<TH ALIGN=RIGHT>9,780</TH>
<TH ALIGN=RIGHT>9,781</TH>
   <TD ALIGN=RIGHT>94,076,581</TD><TD ALIGN=RIGHT>86,317,361</TD>
   <TD ALIGN=RIGHT>95,156,665</TD><TD ALIGN=RIGHT>87,397,445</TD>
   <TD ALIGN=RIGHT>7,759,220</TD><TD ALIGN=RIGHT>%&nbsp;38.20</TD>
   <TD ALIGN=RIGHT>7,759,220</TD><TD ALIGN=RIGHT>%&nbsp;38.02</TD>
   <TD ALIGN=CENTER>[N/A Filarial worm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJNA10729/ Filarial worm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>191089</TH>
<TH ALIGN=CENTER>191089</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.052%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.065%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[ftp://ftp.sanger.ac.uk/pub/wormbase/WS210/genomes/m_hapla/ 20]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melHap1 melHap1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/m_hapla 20]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melHap1 melHap1]</TH>
<TH ALIGN=RIGHT>3,452</TH>
<TH ALIGN=RIGHT>3,452</TH>
   <TD ALIGN=RIGHT>53,017,507</TD><TD ALIGN=RIGHT>53,017,507</TD>
   <TD ALIGN=RIGHT>53,017,507</TD><TD ALIGN=RIGHT>53,017,507</TD>
   <TD ALIGN=RIGHT>0</TD><TD ALIGN=RIGHT>%&nbsp;52.96</TD>
   <TD ALIGN=RIGHT>0</TD><TD ALIGN=RIGHT>%&nbsp;52.96</TD>
   <TD ALIGN=CENTER>[N/A Root knot]</TD><TH ALIGN=CENTER>10.4X</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/WS210/genomes/m_hapla/ M. hapla]</TD><TH ALIGN=CENTER>10.4X</TH>
<TH ALIGN=CENTER>37608</TH>
<TH ALIGN=CENTER>37608</TH>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.916%</TD>
   <TH ALIGN=CENTER>Net</TH><TD ALIGN=RIGHT>3.916%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 21]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2 melInc2]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/m_incognita 21]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=melInc2 melInc2]</TH>
<TH ALIGN=RIGHT>2,996</TH>
<TH ALIGN=RIGHT>2,996</TH>
   <TD ALIGN=RIGHT>86,079,534</TD><TD ALIGN=RIGHT>82,112,681</TD>
   <TD ALIGN=RIGHT>86,079,534</TD><TD ALIGN=RIGHT>82,112,681</TD>
   <TD ALIGN=RIGHT>3,966,853</TD><TD ALIGN=RIGHT>%&nbsp;43.99</TD>
   <TD ALIGN=RIGHT>3,966,853</TD><TD ALIGN=RIGHT>%&nbsp;43.99</TD>
   <TD ALIGN=CENTER>[N/A Root knot]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJEA28837/ M. incognita]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>62516</TH>
<TH ALIGN=CENTER>62516</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>3.516%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>3.516%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 22]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1 oncVol1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000499405.1 22]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=oncVol1 oncVol1]</TH>
<TH ALIGN=RIGHT>709</TH>
<TH ALIGN=RIGHT>710</TH>
   <TD ALIGN=RIGHT>96,441,526</TD><TD ALIGN=RIGHT>93,367,159</TD>
   <TD ALIGN=RIGHT>97,402,144</TD><TD ALIGN=RIGHT>94,327,777</TD>
   <TD ALIGN=RIGHT>3,074,367</TD><TD ALIGN=RIGHT>%&nbsp;37.14</TD>
   <TD ALIGN=RIGHT>3,074,367</TD><TD ALIGN=RIGHT>%&nbsp;37.03</TD>
   <TD ALIGN=CENTER>[N/A O. volvulus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Onchocerca_volvulus/all_assembly_versions/GCA_000499405.1_OVOC001/ O. volvulus]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>25485961</TH>
<TH ALIGN=CENTER>25485961</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.182%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.193%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 23]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1 triSpi1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCF_000181795.1 23]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSpi1 triSpi1]</TH>
<TH ALIGN=RIGHT>6,864</TH>
<TH ALIGN=RIGHT>6,864</TH>
   <TD ALIGN=RIGHT>63,542,128</TD><TD ALIGN=RIGHT>58,555,140</TD>
   <TD ALIGN=RIGHT>63,542,128</TD><TD ALIGN=RIGHT>58,555,140</TD>
   <TD ALIGN=RIGHT>4,986,988</TD><TD ALIGN=RIGHT>%&nbsp;33.95</TD>
   <TD ALIGN=RIGHT>4,986,988</TD><TD ALIGN=RIGHT>%&nbsp;33.95</TD>
   <TD ALIGN=CENTER>[N/A Trichinella]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Trichinella_spiralis/all_assembly_versions/GCA_000181795.2_Trichinella_spiralis-3.7.1/ Trichinella]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>6373445</TH>
<TH ALIGN=CENTER>6373445</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>2.848%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>2.848%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 24]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1 triSui1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000701005.1 24]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=triSui1 triSui1]</TH>
<TH ALIGN=RIGHT>4,293</TH>
<TH ALIGN=RIGHT>4,293</TH>
   <TD ALIGN=RIGHT>74,248,995</TD><TD ALIGN=RIGHT>71,825,189</TD>
   <TD ALIGN=RIGHT>74,248,995</TD><TD ALIGN=RIGHT>71,825,189</TD>
   <TD ALIGN=RIGHT>2,423,806</TD><TD ALIGN=RIGHT>%&nbsp;12.36</TD>
   <TD ALIGN=RIGHT>2,423,806</TD><TD ALIGN=RIGHT>%&nbsp;12.36</TD>
   <TD ALIGN=CENTER>[N/A Whipworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Trichuris_suis/all_assembly_versions/GCA_000701005.1_Tsuis_adult_male_v1.0/ Whipworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>503034</TH>
<TH ALIGN=CENTER>503034</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>2.917%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>2.917%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 25]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1 dirImm1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.wormbase.org/species/d_immitis 25]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=dirImm1 dirImm1]</TH>
<TH ALIGN=RIGHT>16,062</TH>
<TH ALIGN=RIGHT>16,062</TH>
   <TD ALIGN=RIGHT>88,323,343</TD><TD ALIGN=RIGHT>84,892,734</TD>
   <TD ALIGN=RIGHT>88,323,343</TD><TD ALIGN=RIGHT>84,892,734</TD>
   <TD ALIGN=RIGHT>3,430,609</TD><TD ALIGN=RIGHT>%&nbsp;39.12</TD>
   <TD ALIGN=RIGHT>3,430,609</TD><TD ALIGN=RIGHT>%&nbsp;39.12</TD>
   <TD ALIGN=CENTER>[N/A Dog heartworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.sanger.ac.uk/pub/wormbase/releases/WS245/species/PRJEB1797/ Dog heartworm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>71281</TH>
<TH ALIGN=CENTER>71281</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.005%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.005%</TD>
<TD ALIGN=RIGHT>1000</TD>
<TD ALIGN=RIGHT>1000</TD>
   <TD ALIGN=CENTER>loose</TD></TR>
   <TD ALIGN=CENTER>loose</TD></TR>
<TR><TH ALIGN=RIGHT>[N/A 26]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1 loaLoa1]</TH>
<TR><TH ALIGN=RIGHT>[http://www.ncbi.nlm.nih.gov/assembly/GCA_000183805.3 26]</TH><TH ALIGN=RIGHT>[http://genome-test.cse.ucsc.edu/cgi-bin/hgTracks?db=loaLoa1 loaLoa1]</TH>
<TH ALIGN=RIGHT>5,765</TH>
<TH ALIGN=RIGHT>5,765</TH>
   <TD ALIGN=RIGHT>91,379,422</TD><TD ALIGN=RIGHT>87,532,183</TD>
   <TD ALIGN=RIGHT>91,379,422</TD><TD ALIGN=RIGHT>87,532,183</TD>
   <TD ALIGN=RIGHT>3,847,239</TD><TD ALIGN=RIGHT>%&nbsp;32.15</TD>
   <TD ALIGN=RIGHT>3,847,239</TD><TD ALIGN=RIGHT>%&nbsp;32.15</TD>
   <TD ALIGN=CENTER>[N/A Eye worm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
   <TD ALIGN=CENTER>[ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/invertebrate/Loa_loa/all_assembly_versions/GCA_000183805.3_Loa_loa_V3.1/ Eye worm]</TD><TH ALIGN=CENTER>&nbsp;</TH>
<TH ALIGN=CENTER>174388</TH>
<TH ALIGN=CENTER>174388</TH>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.056%</TD>
   <TD ALIGN=CENTER>Net</TD><TD ALIGN=RIGHT>5.056%</TD>

Revision as of 20:33, 27 August 2015

see also

statistics collected from UCSC 2bit files

  • The external link in the first column goes to the FTP location where the genome sequence was obtained
  • The external links from the UCSC database name go to the UCSC genome-test browser for that genome
  • N bases == unknown bases in the assembly marked by "N"
  • non-N bases == called bases in the assembly
  • total size == all bases in assembly, N and non-N
  • The % masked is masking from Repeat Masker or Window Masker plus TRF/Simple Repeats, whichever is greater, usually WindowMasker for these genomes
  • The common name external links go to information pages for this genome
  • The coverage numbers are taken directly from information README files from the sequencing center
  • The N50 size is calculated directly from the UCSC chrom.sizes file which is the size of the chromosomes as seen in the UCSC genome browser

do not edit, automatically generated table

order
count/
ftp src
ucsc
db name/
genome-test
chrom
count
total
size
non-N
bases
N base
count
% masked common name/
src info
coverage N50
chrom.sizes
alignment type % of ce11
matched
(chainLink table)
chain
minScore
chain
linearGap
01ce11 7 100,286,401100,286,401 0% 12.62 C. elegans  17493829 N/AN/A N/A N/A
02caeJap4 18,817 166,256,191154,057,934 12,198,257% 46.77 C. japonica22X 94149 Net27.709% 1000 loose
03caePb3 3,305 190,369,721170,093,638 20,276,083% 29.30 C. brenneri9.5X 381961 Net40.638% 1000 loose
04caeRem4 3,670 145,442,736138,406,203 7,036,533% 30.48 C. remanei9.2X 435512 Net41.715% 1000 loose
05caeSp111 665 79,321,43376,497,192 2,824,241% 29.15 C. tropicalis20.2X 20921866 Net37.870% 1000 loose
06cb4 13 108,434,085105,430,959 3,003,126% 36.52 C. briggsae10X 17485439 Net39.384% 1000 loose
07caeAng2 34,621 105,997,62894,555,035 11,442,593% 39.91 C. angaria  79858 Net17.682% 1000 loose
08caeSp51 15,261 131,797,386130,391,159 1,406,227% 28.16 C. sp. 5 ju800  25228 Net40.332% 1000 loose
09hetBac1 1,241 76,992,47774,374,900 2,617,577% 24.47 H. bacteriophora/m31e  312328 Net10.486% 1000 loose
10panRed1 941 65,110,23662,090,108 3,020,128% 14.57 Microworm  262414 Net6.585% 1000 loose
11strRat2 135 43,150,24242,896,169 254,073% 55.64 Threadworm  11693564 Net5.669% 1000 loose
12ascSuu1 12,989 269,573,965262,604,319 6,969,646% 21.48 Pig roundworm  413062 Net5.722% 1000 loose
13haeCon2 23,823 369,720,058345,915,897 23,804,161% 21.16 Barber pole worm  83299 Net8.936% 1000 loose
14ancCey1 1,736 313,092,710300,901,610 12,191,100% 22.06 A. ceylanicum  668412 Net9.736% 1000 loose
15necAme1 11,865 244,088,665208,187,215 35,901,450% 25.80 N. americanus  211861 Net8.902% 1000 loose
16priExs1 4,369 177,536,987166,915,502 10,621,485% 23.30 P. exspectatus  142245 Net6.222% 1000 loose
17priPac3 18,084 172,510,819153,208,199 19,302,620% 23.93 P. pacificus  1244534 Net6.308% 1000 loose
18burXyl1 5,528 74,576,23973,100,506 1,475,733% 28.93 Pine wood nematode  949830 Net6.291% 1000 loose
19bruMal2 9,781 95,156,66587,397,445 7,759,220% 38.02 Filarial worm  191089 Net5.065% 1000 loose
20melHap1 3,452 53,017,50753,017,507 0% 52.96 M. hapla10.4X 37608 Net3.916% 1000 loose
21melInc2 2,996 86,079,53482,112,681 3,966,853% 43.99 M. incognita  62516 Net3.516% 1000 loose
22oncVol1 710 97,402,14494,327,777 3,074,367% 37.03 O. volvulus  25485961 Net5.193% 1000 loose
23triSpi1 6,864 63,542,12858,555,140 4,986,988% 33.95 Trichinella  6373445 Net2.848% 1000 loose
24triSui1 4,293 74,248,99571,825,189 2,423,806% 12.36 Whipworm  503034 Net2.917% 1000 loose
25dirImm1 16,062 88,323,34384,892,734 3,430,609% 39.12 Dog heartworm  71281 Net5.005% 1000 loose
26loaLoa1 5,765 91,379,42287,532,183 3,847,239% 32.15 Eye worm  174388 Net5.056% 1000 loose