User contributions for Marygoldman

2 March 2011

• 20:5820:58, 2 March 2011 diff hist 0‎ Resolving merge conflicts in Git ‎ →‎git reset
• 20:5720:57, 2 March 2011 diff hist +273‎ Resolving merge conflicts in Git ‎ →‎Great tools to help you resolve a merge conflict
• 20:5020:50, 2 March 2011 diff hist −5‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 19:5619:56, 2 March 2011 diff hist +7‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 19:5519:55, 2 March 2011 diff hist +36‎ Resolving merge conflicts in Git ‎ →‎Common questions
• 01:2201:22, 2 March 2011 diff hist −1‎ Resolving merge conflicts in Git ‎ →‎Git is unable to resolve a merge/pull
• 01:2201:22, 2 March 2011 diff hist −1‎ Resolving merge conflicts in Git ‎ →‎Git refuses to start a merge/pull
• 01:2101:21, 2 March 2011 diff hist +229‎ Resolving merge conflicts in Git ‎ →‎Tools to help you resolve a merge conflict
• 01:1901:19, 2 March 2011 diff hist +1,322‎ Resolving merge conflicts in Git ‎ →‎Common questions
• 00:5100:51, 2 March 2011 diff hist +63‎ Resolving merge conflicts in Git ‎ adding a common questions section
• 00:4900:49, 2 March 2011 diff hist +59‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge/git pull can fail
• 00:4900:49, 2 March 2011 diff hist +9‎ Resolving merge conflicts in Git ‎ →‎Two ways git merge can fail
• 00:4900:49, 2 March 2011 diff hist +558‎ Resolving merge conflicts in Git ‎ →‎Why would my Merge Fail?

25 February 2011

• 18:2318:23, 25 February 2011 diff hist +49‎ Conservation Track QA ‎ →‎QAing the track
• 17:3017:30, 25 February 2011 diff hist +19‎ m Conservation Track QA ‎ →‎QAing the track
• 01:4801:48, 25 February 2011 diff hist +147‎ Conservation Track QA ‎ →‎Check trackDb.ra file
• 01:2801:28, 25 February 2011 diff hist −1‎ Conservation Track QA ‎ →‎Make sure hgPal works with this set of tables:
• 01:2801:28, 25 February 2011 diff hist +34‎ Conservation Track QA ‎ →‎QAing the track: reorganizing
• 01:2201:22, 25 February 2011 diff hist −3‎ Conservation Track QA ‎ →‎Things we used to do to QA the conservation track but no longer do
• 01:1201:12, 25 February 2011 diff hist +78‎ Conservation Track QA ‎ →‎Preparing to QA
• 01:1101:11, 25 February 2011 diff hist +32‎ Conservation Track QA ‎ →‎Check one maf file
• 01:0601:06, 25 February 2011 diff hist +4‎ Conservation Track QA ‎ →‎QAing track
• 00:1400:14, 25 February 2011 diff hist +79‎ Conservation Track QA ‎ →‎Read both README files
• 00:1100:11, 25 February 2011 diff hist +1‎ Conservation Track QA ‎ →‎Contact Galaxy:
• 00:1100:11, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Make sure hgPal works with this set of tables:
• 00:1100:11, 25 February 2011 diff hist +1‎ Conservation Track QA ‎ →‎Test in the tables
• 00:1100:11, 25 February 2011 diff hist +1‎ Conservation Track QA ‎ →‎Test in the Genome Browser
• 00:1100:11, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Figure out extFile and seq tables
• 00:1000:10, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Check multizway#wayFrames table
• 00:1000:10, 25 February 2011 diff hist −2,820‎ Conservation Track QA ‎ →‎Preparing to QA
• 00:0800:08, 25 February 2011 diff hist +2,586‎ Conservation Track QA ‎ →‎Preparing to QA
• 00:0300:03, 25 February 2011 diff hist +20‎ Conservation Track QA ‎ →‎Make a list of all organisms for which there are nets & chains:
• 00:0200:02, 25 February 2011 diff hist +2‎ Conservation Track QA ‎ →‎Make sure that pushQ entry has all gbdb files and downloads needed for the track
• 00:0200:02, 25 February 2011 diff hist −221‎ Conservation Track QA ‎ →‎Make a list of all organisms in the Conservation track:
• 00:0000:00, 25 February 2011 diff hist +4‎ Conservation Track QA ‎ →‎Pre-QA prep

24 February 2011

• 23:1423:14, 24 February 2011 diff hist +161‎ Conservation Track QA ‎ →‎QAing Conservation and Most Conserved tracks for a new assembly

23 February 2011

• 19:5919:59, 23 February 2011 diff hist +94‎ Releasing an assembly ‎ →‎Pre-staging of assembly on hgwbeta: adding bit to claim main pushQ entry

22 February 2011

• 22:5722:57, 22 February 2011 diff hist −5‎ Releasing an assembly ‎ →‎Push the database and tables from hgwdev to hgwbeta
• 19:3019:30, 22 February 2011 diff hist −80‎ Releasing an assembly ‎ →‎Announce the Release on genome-announce@soe.ucsc.edu and genecats@soe.ucsc.edu
• 19:2919:29, 22 February 2011 diff hist −7‎ Releasing an assembly ‎ →‎Verify downloads
• 19:2819:28, 22 February 2011 diff hist 0‎ Releasing an assembly ‎ →‎Stage assembly on Round Robin
• 19:2819:28, 22 February 2011 diff hist −124‎ Releasing an assembly ‎ →‎Ensure the active column in hgcentral.dbDb is set to 0
• 19:2619:26, 22 February 2011 diff hist −116‎ Releasing an assembly ‎ →‎Enable Assembly on RR and post-release follow-up

14 February 2011

• 22:5322:53, 14 February 2011 diff hist −526‎ Releasing an assembly ‎ →‎Chain/Nets/LiftOvers from other organisms
• 22:3822:38, 14 February 2011 diff hist +223‎ Releasing an assembly ‎ →‎blatServers, genomeClade, gdbPdb (NOT liftOver)
• 22:3422:34, 14 February 2011 diff hist +166‎ Releasing an assembly ‎ →‎Review all tracks in the sub-pushQ

8 February 2011

• 02:0102:01, 8 February 2011 diff hist +40‎ Releasing an assembly ‎ →‎If the new assembly is an update to the human, mouse, rat, zebrafish, D. melanogaster, C. elegans, or S. cerevisiae genomes, make sure that the appropriate blastTab tables to this assembly are built
• 02:0002:00, 8 February 2011 diff hist +50‎ Releasing an assembly ‎ →‎Check the release log
• 02:0002:00, 8 February 2011 diff hist +78‎ Releasing an assembly ‎ →‎Enable Assembly on RR and post-release follow-up
• 01:5901:59, 8 February 2011 diff hist −164‎ Releasing an assembly ‎ →‎Next day follow-up