CavPor3 5-way conservation alignment
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Revision as of 17:30, 9 May 2016 by Hiram (talk | contribs) (Created page with "==see also== <UL> <LI>Guinea pig 5-way CavPor3 5-way Genome size statistics</LI> <LI>Guinea pig 5-way CavPor3 5-way conservation lastz parameters</LI> <LI>all ...")
see also
- Guinea pig 5-way CavPor3 5-way Genome size statistics
- Guinea pig 5-way CavPor3 5-way conservation lastz parameters
- all other UCSC Multiple Alignments
do not edit
This table is automatically generated off-line from the UCSC databases. Please do not edit it.
| URL to assembly sequence |
UCSC db name/ genome-preview browser |
Scientific name/ assembly information |
Common name |
assembly date (version) | source version |
Repeat Masker |
Window Masker |
chain on cavPor3 |
% of cavPor3 matched (chainLink table) |
|---|---|---|---|---|---|---|---|---|---|
| 01 | cavPor3 | Cavia porcellus | Guinea pig | Feb. 2008 (Broad/cavPor3) | Broad Institute cavPor3 | 2009-08-15 | 2009-08-15 | N/A | N/A |
| 02 | galVar1 | Galeopterus variegatus | Malayan flying lemur | Jun. 2014 (G_variegatus-3.0.2/galVar1) | Washington University (WashU) | 2016-03-02 | 2016-03-04 | 2016-04-15 | 48.820% |
| 03 | hg38 | Homo sapiens | Human | Dec. 2013 (GRCh38/hg38) | GRCh38 Genome Reference Consortium Human Reference 38 (GCA_000001405.2) | 2014-01-10 | 2013-12-25 | 2015-04-29 | 48.000% |
| 04 | tupBel1 | Tupaia belangeri | Tree shrew | Dec. 2006 (Broad/tupBel1) | Broad Institute tupBel1 (NCBI project 13971, AAPY01000000) | 2009-09-02 | 2012-05-03 | 2016-04-15 | 27.994% |
| 05 | mm10 | Mus musculus | Mouse | Dec. 2011 (GRCm38/mm10) | Genome Reference Consortium Mouse Build 38 (GCA_000001635.2) | 2012-02-06 | 2012-02-07 | 2012-03-19 | 29.115% |
