ENCODE Project at UCSC

UCSC is the official repository for sequence-based data generated by the Encyclopedia of DNA Elements (ENCODE) Project. The UCSC ENCODE portal is: http://genome.ucsc.edu/ENCODE. Here are some project links:

• ENCODE Pipeline Task List
• ENCODE Data Coordination Center Project List
• DCC pipeline discussion
• DCC metadata discussion
• Graph data format discussion
• ENCODE Hg18 Migration
• Encode scenarios